BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B03SP1|AL428328
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1354 1742 0.0
>3x_Contig1354
Length = 7778
Score = 1742 bits (878), Expect = 0.0
Identities = 879/880 (99%)
Strand = Plus / Minus
Query: 1 gatcggccgattgtgaattatggctggtttcactctgtttccagtttggagtggcagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 gatcggccgattgtgaattatggctggtttcactctgtttccagtttggagtggcagatg 6409
Query: 61 caagaccagatttaaatatccaatatatgcatgagtgatgttgaaaagggacacgggagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6408 caagaccagatttaaatatccaatatatgcatgagtgatgttgaaaagggacacgggagt 6349
Query: 121 taaggtgatcgaaaggcgttttactctcaggtgtggtacgagagattgcgtattgccgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6348 taaggtgatcgaaaggcgttttactctcaggtgtggtacgagagattgcgtattgccgtg 6289
Query: 181 cgccagtttttcggtatgtaaattgtgttttctattctagcctttcgttttattttccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6288 cgccagtttttcggtatgtaaattgtgttttctattctagcctttcgttttattttccta 6229
Query: 241 atctggctcttctggtctcagcccgatgtctcttcctttttcccttccgacccacccacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6228 atctggctcttctggtctcagcccgatgtctcttcctttttcccttccgacccacccacc 6169
Query: 301 cactcatcaatctctgttacagttgctatatattgtttatttctattattattctttttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6168 cactcatcaatctctgttacagttgctatatattgtttatttctattattattctttttc 6109
Query: 361 atatgctgtcggtggtaataagtattgtcgatacactagaccctgaaggtaaacaagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6108 atatgctgtcggtggtaataagtattgtcgatacactagaccctgaaggtaaacaagctt 6049
Query: 421 gcccaccgtcagttgtcttgtaactgttcctgtttttgagtcgtgcagttgtttaacatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6048 gcccaccgtcagttgtcttgtaactgttcctgtttttgagtcgtgcagttgtttaacatc 5989
Query: 481 tcgtgatttttatatgtatcccgcatttggagaaaaaggtacgggtactgttaagaacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5988 tcgtgatttttatatgtatcccgcatttggagaaaaaggtacgggtactgttaagaacac 5929
Query: 541 tttctctgccttcactgccttcgttgctgctgtctgctgagataccgtacttttttttta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5928 tttctctgccttcactgccttcgttgctgctgtctgctgagataccgtacttttttttta 5869
Query: 601 gttttttttttatttcctttgccataatagaaagaatttcacaccgttatactttaacag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5868 gttttttttttatttcctttgccataatagaaagaatttcacaccgttatactttaacag 5809
Query: 661 tggtctttttttaaacaactatgaactggttttacgtttggtggtatttcgggaacgaga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5808 tggtctttttttaaacaactatgaactggttttacgtttggtggtatttcgggaacgaga 5749
Query: 721 ttcggttcagatacagtttacattattgggacatagcttatatcagcaggggccattcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5748 ttcggttcagatacagtttacattattgggacatagcttatatcagcaggggccattcaa 5689
Query: 781 gcctgctttgcatctgtctctctcttcctctctttctcttttttttttcctgcttactgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5688 gcctgctttgcatctgtctctctcttcctctctttctcttttttttttcctgcttactgc 5629
Query: 841 ctttcttcttcctgtttgattcagtgattcattcaawtca 880
|||||||||||||||||||||||||||||||||||| |||
Sbjct: 5628 ctttcttcttcctgtttgattcagtgattcattcaattca 5589
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9957
Number of Sequences: 1807
Number of extensions: 9957
Number of successful extensions: 200
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)